Whenever I crave something comforting with a smoky kick, this Chipotle Mac and Cheese Recipe is my go-to. It’s got that rich, creamy cheese sauce everyone loves, elevated by a smoky chipotle punch that makes it feel special without being overpowering. Honestly, when I first tried adding chipotle paste, I wasn’t sure how it would turn out, but now it’s a staple in my kitchen for cozy weeknight dinners or potlucks.

This recipe works beautifully for feeding a crowd or just treating yourself because it bakes up golden and bubbly with that irresistible crispy breadcrumb topping. You’ll also appreciate how easy it is to prepare—the trick is in timing your pasta and sauce just right, and I’ll walk you through that. Once you nail this Chipotle Mac and Cheese Recipe, you’ll find yourself making it again and again.

❤️

Why You’ll Love This Recipe

  • Smoky, Comforting Flavor: The chipotle paste adds a smoky depth that perfectly balances the creamy cheese.
  • Crispy, Golden Topping: The panko breadcrumbs baked on top give a delightful crunch that contrasts the gooey pasta.
  • Perfectly Cheesy Sauce: The combination of cheddar and mozzarella creates a smooth, luscious cheese sauce every time.
  • Easy to Customize: You can adjust the spice level or swap ingredients to suit your taste and pantry.

Ingredients You’ll Need

You’ll see this Chipotle Mac and Cheese Recipe calls for classic ingredients paired with a few flavorful extras. Each one plays a role in building that creamy, smoky, and crunchy final dish you’ll love.

  • Macaroni: The traditional pasta choice that holds the cheese sauce well and bakes beautifully without becoming mushy.
  • Milk: Using room temperature milk helps the sauce thicken evenly without lumps.
  • Bacon: Adds smoky, salty goodness and fat to start your roux—plus, who doesn’t love bacon bits in mac?
  • Cheddar: Sharp cheddar provides the rich, tangy base cheese flavor essential for mac and cheese.
  • Mozzarella: Adds smooth meltiness and stretch, making the sauce feel incredibly indulgent.
  • Flour: Key for thickening the sauce when making your roux with butter and bacon fat.
  • Unsalted Butter: Helps create that silky roux without adding extra salt.
  • Chipotle Paste: This smoky chili paste gives the dish its signature smoky spice—adjust to your heat tolerance.
  • Smoked Paprika & Spices: Complement the chipotle with extra smoky and savory notes.
  • Panko Breadcrumbs: Light and crunchy, they brown beautifully on top for that perfect baked finish.
  • Salt & Pepper: Balance all the flavors and bring the dish together.
  • Oil Spray: Helps the breadcrumbs crisp up in the oven without burning.
Note: You’ll find the complete list of ingredients, along with their exact measurements, in the printable recipe card at the bottom of this post.

Variations

I love playing around with this Chipotle Mac and Cheese Recipe depending on what I have on hand or the occasion. Feel free to swap in your favorite cheeses or add-ins to make it your own—you’ll be surprised how versatile this dish can be.

  • Spicy Boost: For those who like it hotter, I sometimes double the chipotle paste or add a pinch of cayenne to really awaken the flavors.
  • Cheese Swap: If you want a creamier texture, try mixing in some Monterey Jack or gouda instead of mozzarella.
  • Vegetarian Version: Skip the bacon and use smoked paprika and a little liquid smoke for that smoky flavor without meat.
  • Gluten-Free: Use gluten-free pasta and substitute the flour with a gluten-free alternative like rice flour.

How to Make Chipotle Mac and Cheese Recipe

Step 1: Cook Bacon Until Crispy

Start by frying the diced bacon in a pan over medium heat until it’s crisp and the fat has rendered out. This step is crucial because the bacon fat becomes part of your roux, adding extra depth to the cheese sauce. Once done, keep the bacon in the pan with the fat for the next step—don’t drain it!

Step 2: Make the Roux and Cheese Sauce

Into the pan with bacon fat, melt the butter, then stir in the flour until it forms a paste—this is your roux, which will thicken the sauce. Slowly pour in the room temperature milk while whisking constantly to avoid lumps. Don’t rush this part; if your sauce feels watery after adding the milk, just simmer gently and keep stirring—it’ll thicken before you add the cheese. Once thickened, stir in the chipotle paste and spices, then turn off the heat before adding the cheddar and mozzarella. It might look stringy at first, but it smooths out beautifully once combined with the pasta and baked.

Step 3: Cook Pasta Al Dente

While your sauce thickens, boil the macaroni in salted water until it’s just al dente — you want it still a bit firm because it will keep cooking in the oven. Overcooked pasta can get mushy after baking, so keeping it slightly underdone is a small but important trick I learned after some trial and error.

Step 4: Combine and Bake

Once your pasta is drained, stir it directly into the cheese sauce until well coated. Transfer everything to a baking dish. Sprinkle a generous layer of panko breadcrumbs on top and spray them with oil to help achieve that golden crust. Bake in a preheated oven at 200°C (390°F) for 20-25 minutes until bubbly and golden brown. This is where the magic happens—the top crisps up, and the flavors meld together perfectly.

👨‍🍳

Pro Tips for Making Chipotle Mac and Cheese Recipe

  • Room Temperature Milk: Adding cold milk can cause lumps; warming it slightly or bringing to room temp makes a smoother sauce.
  • Don’t Overcook Pasta: Keep it firm at boiling stage because it’ll keep softening during baking.
  • Let Sauce Thicken: Thick sauce prevents grainy cheese and ensures a creamy texture.
  • Use Panko and Oil Spray: Lightly spraying oil on panko breadcrumbs helps them brown without burning.

How to Serve Chipotle Mac and Cheese Recipe

The image shows a close-up of a scoop of macaroni and cheese being lifted with a black spoon. The macaroni is coated in creamy, melted orange-yellow cheese with visible gooey cheese strands stretching down from the spoon. The top layer has a crumbly, golden-brown breadcrumb crust adding texture and color contrast. The dish sits on a blurry white marbled surface background. Photo taken with an iphone --ar 4:5 --v 7

Garnishes

I usually keep garnishes simple—a sprinkle of chopped fresh parsley or chives adds a pop of color and freshness that balances the rich, smoky flavors. Sometimes I add a squeeze of lime for a bit of brightness, which pairs surprisingly well with the chipotle.

Side Dishes

For a well-rounded meal, I like serving this mac and cheese with a crisp green salad or roasted vegetables like broccoli and Brussels sprouts. The freshness and crunch help cut through the richness of the dish.

Creative Ways to Present

For a fun twist at parties, try serving the Chipotle Mac and Cheese Recipe in small individual ramekins or even inside hollowed-out mini pumpkins for a seasonal flair. It’s a showstopper that’s as tasty as it looks!

Make Ahead and Storage

Storing Leftovers

After the meal, I pop leftover mac and cheese into an airtight container and refrigerate it. It keeps well for up to 3 days, although I recommend reheating gently to maintain that creamy texture. I’ve found that adding a splash of milk when reheating helps bring it back to life.

Freezing

You can freeze this mac and cheese before baking by storing it in a freezer-safe dish. Just cover tightly with foil and freeze for up to 2 months. When ready, thaw overnight in the fridge before baking as usual. I learned that freezing after baking tends to change the texture, so prepping ahead is best.

Reheating

To reheat, I like warming it in the oven at 350°F (175°C) for about 15-20 minutes with a drizzle of milk on top and covered loosely with foil. This helps keep it from drying out while restoring that gooey deliciousness.

FAQs

  1. Can I make this Chipotle Mac and Cheese Recipe vegan or dairy-free?

    Absolutely! You can substitute the cheese with vegan cheese alternatives and use plant-based milk like oat or almond milk. For a smoky flavor, try adding smoked paprika and chipotle in adobo sauce made without animal products. Keep in mind the sauce texture might vary slightly but still delicious!

  2. How spicy is this recipe, and can I adjust the heat?

    The chipotle paste gives a moderate smoky heat that’s balanced by the creamy cheese, so it’s flavorful without being fiery. If you prefer less spice, start with 1 tablespoon of chipotle paste or reduce it further; if you like it spicy, add more or supplement with cayenne pepper.

  3. What’s the best way to get a crunchy topping?

    Using panko breadcrumbs and spraying them lightly with oil before baking helps develop that perfect golden crunch. If you don’t have panko, regular breadcrumbs work fine but may be less crispy. Keep an eye during baking to avoid burning.

  4. Can I prepare the sauce in advance?

    You can make the cheese sauce a day ahead and refrigerate it; just reheat gently while adding a splash of milk to loosen it up before mixing with pasta. Freshly combining and baking the mac and cheese just before serving yields the best texture and flavor.

Final Thoughts

Honestly, this Chipotle Mac and Cheese Recipe has become one of my favorite comfort foods because it’s so simple yet packed with smoky, cheesy goodness. I love how approachable it is—you don’t need fancy ingredients, just a few kitchen staples and a bit of time. If you want to wow your family or just treat yourself to something comforting and unique, give this one a try. I’m pretty sure you’ll end up making it a regular too, just like me!

Print
clock clock iconcutlery cutlery iconflag flag iconfolder folder iconinstagram instagram iconpinterest pinterest iconfacebook facebook iconprint print iconsquares squares iconheart heart iconheart solid heart solid icon

Chipotle Mac and Cheese Recipe

5 Stars 4 Stars 3 Stars 2 Stars 1 Star 4.9 from 121 reviews
  • Author: Jasmine
  • Prep Time: 10 minutes
  • Cook Time: 40 minutes
  • Total Time: 50 minutes
  • Yield: 6 servings
  • Category: Main Course
  • Method: Baking
  • Cuisine: American

Description

A creamy and smoky chipotle mac and cheese recipe featuring crispy bacon, a blend of cheddar and mozzarella cheeses, and a spicy chipotle kick. This baked macaroni and cheese combines a smooth cheese sauce with al dente pasta, topped with crunchy panko breadcrumbs for a deliciously comforting meal perfect for any occasion.


Ingredients

Units Scale

Pasta

  • 14oz / 400g Macaroni

Cheese Sauce

  • 4 cups / 1 litre Milk, at room temperature
  • 3 heaped tbsp Flour
  • 3 tbsp Unsalted Butter
  • 3 cups / 300g Cheddar, grated
  • 1.5 cups / 150g Mozzarella, grated/shredded

Flavorings & Seasonings

  • 1-2 tbsp Chipotle Paste
  • 1 tsp Smoked Paprika
  • 1 tsp Garlic Powder
  • 1/2 tsp Onion Powder
  • Salt & Pepper, to taste

Additional Ingredients

  • 9oz / 250g Bacon, diced
  • 1/2 cup / 30g Panko Breadcrumbs (or as needed)
  • Oil Spray, as needed

Instructions

  1. Cook the bacon: In a pan over medium heat, add diced bacon and fry until crispy and fully rendered. Keep the bacon fat in the pan to use for the sauce.
  2. Make roux base: Melt 3 tablespoons of unsalted butter in the same pan with the bacon fat, then stir in 3 heaped tablespoons of flour until a paste forms, cooking gently.
  3. Add milk gradually: Slowly pour in 4 cups (1 litre) of room temperature milk while whisking constantly to avoid lumps. Continue simmering until the sauce thickens thoroughly to avoid graininess when adding cheese.
  4. Cook pasta: Meanwhile, cook macaroni in salted boiling water until just al dente—slightly firm to the bite. Drain and set aside. Preheat oven to 200°C / 390°F.
  5. Season the sauce: Stir in 1-2 tablespoons chipotle paste, 1 teaspoon smoked paprika, 1 teaspoon garlic powder, 1/2 teaspoon onion powder, salt, and pepper to the thickened sauce. Mix well, then turn off heat.
  6. Add cheese: Stir grated cheddar and mozzarella into the sauce until fully melted and smooth.
  7. Combine pasta and cheese sauce: Fold in the al dente pasta until evenly coated with the chipotle cheese sauce.
  8. Assemble and prepare to bake: Pour the combined mixture into a baking dish. Sprinkle panko breadcrumbs evenly over the top, then spray liberally with oil to encourage crispness.
  9. Bake: Place the dish in the preheated oven and bake for 20-25 minutes until the top is golden and bubbly.

Notes

  • Panko Breadcrumbs: Panko breadcrumbs provide a light, crisp topping and are found in most supermarkets’ Asian sections. Regular breadcrumbs or homemade crumbs from stale bread can be used as alternatives.
  • Chipotle Paste: Spice intensity varies between brands. Typically, 2 tablespoons works well. The heat mellows while baking. If unavailable, substitute chipotle powder and adjust to taste.
  • Al Dente Pasta: Pasta should be slightly firm as it will soften more during baking. Do not overcook during boiling.
  • Calories: Nutritional estimates are based on whole milk, 30g panko, and the recipe divided into six servings.

Nutrition

  • Serving Size: 1/6th of recipe
  • Calories: 570 kcal
  • Sugar: 7 g
  • Sodium: 650 mg
  • Fat: 32 g
  • Saturated Fat: 18 g
  • Unsaturated Fat: 12 g
  • Trans Fat: 0.5 g
  • Carbohydrates: 45 g
  • Fiber: 2 g
  • Protein: 26 g
  • Cholesterol: 95 mg

Similar Posts

Leave a Reply

Your email address will not be published. Required fields are marked *

Recipe rating 5 Stars 4 Stars 3 Stars 2 Stars 1 Star